# CheckV viral genome quality assessment environment.
# Create with:  conda env create -f envs/checkv.yml
# Download its database once, then export a stable path:
#   conda activate checkv && checkv download_database $VIROME_DB/checkv
#   ln -sfn "$(find $VIROME_DB/checkv -maxdepth 2 -type d -name 'checkv-db*' | head -n1)" $VIROME_DB/checkv-db
#   echo 'export CHECKVDB=$VIROME_DB/checkv-db' >> ~/.bashrc
name: checkv
channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - python=3.10
  - checkv